registration progress save

This commit is contained in:
2023-06-25 23:16:48 +02:00
parent fec3d38a0a
commit 9a7aaefb8f
3 changed files with 1187 additions and 45 deletions
+423 -17
View File
@@ -30,7 +30,7 @@ from data.cloth3d_io import (
from smpl.smpl_torch import SMPL
# from custom_utils.custom_utils import _maskFaces
device = 'cuda'
device = 'cpu'
smpl = SMPL(device, 'smpl')
@@ -315,7 +315,7 @@ def register(folder, frame):
return mesh_normal_consistency(mesh)
# Optimization loop
for i in range(4000):
for i in range(1):
optimizer.zero_grad()
# find boundaries with the find holes function?
@@ -430,20 +430,139 @@ def register(folder, frame):
pass
def order(verts, edges):
# Choose a starting vertex
start_vertex = 0
# Initialize the visited and ordered arrays
visited = np.zeros(verts.shape[0], dtype=bool)
ordered_vertices = []
ordered_edges = []
# Define the depth-first search function
def dfs(vertex):
visited[vertex] = True
ordered_vertices.append(vertex)
for i in range(edges.shape[0]):
if edges[i, 0] == vertex and not visited[edges[i, 1]]:
ordered_edges.append(i)
dfs(edges[i, 1])
elif edges[i, 1] == vertex and not visited[edges[i, 0]]:
ordered_edges.append(i)
dfs(edges[i, 0])
# Perform depth-first search starting from the chosen vertex
dfs(start_vertex)
return ordered_vertices, ordered_edges
def reindex_edges(edges, mask):
lines_new = np.zeros_like(edges)
for i in range(edges.shape[0]):
line_1 = edges[i,0]
line_2 = edges[i,1]
line_1_new = line_1 - np.count_nonzero(~mask[:line_1])
line_2_new = line_2 - np.count_nonzero(~mask[:line_2])
lines_new[i] = [line_1_new, line_2_new]
lines_new = np.asarray(lines_new)
return lines_new
def reindex_vertices(verts, mask):
verts_new = np.zeros_like(verts)
for i in range(verts.shape[0]):
vert = verts[i]
vert_new = vert - np.count_nonzero(~mask[:vert])
verts_new[i] = vert_new
verts_new = np.asarray(verts_new)
return verts_new
def generate_edges(registered_cloth, registered_holes, registered_border):
lines = registered_holes.lines
lines_filtered = []
for i in range(0, lines.shape[0]-2, 3):
ind = np.argwhere(np.all(registered_cloth == registered_holes.points[lines[i]], axis=1))
ind2 = np.argwhere(np.all(registered_cloth == registered_holes.points[lines[i+1]], axis=1))
if ind.ravel() in registered_border and ind2.ravel() in registered_border:
lines_filtered.append(lines[i+1:i+3])
lines = np.array(lines_filtered)
return lines
def reindex_lines(lines, registered_border_mask):
lines_new = np.zeros_like(lines)
for i in range(lines.shape[0]):
line_1 = lines[i,0]
line_2 = lines[i,1]
line_1_new = line_1 - np.count_nonzero(~registered_border_mask[:line_1])
line_2_new = line_2 - np.count_nonzero(~registered_border_mask[:line_2])
lines_new[i] = [line_1_new, line_2_new]
lines_new = np.asarray(lines_new)
return lines_new
def get_boundary_components(registered_border, lines_new):
from scipy.sparse import csr_matrix
from scipy.sparse.csgraph import connected_components
n = len(registered_border)
adj_matrix = csr_matrix((np.ones(lines_new.shape[0]), (lines_new[:, 0], lines_new[:, 1])), shape=(n, n))
# Find the connected components of the graph
n_components, labels = connected_components(adj_matrix)
registered_border = np.array(registered_border)
bounds = []
bounds_edges_global = []
bounds_edges_local = []
for i in range(n_components):
ind = np.argwhere(labels == i)[:,0]
if len(ind) < 10:
continue
bounds.append(registered_border[ind])
temp_global = []
temp_local = []
for j in range(lines_new.shape[0]):
if lines_new[j, 0] in ind and lines_new[j, 1] in ind:
# if lines_new[j, 0] < lines_new[j, 1]:
temp_global.append(registered_border[lines_new[j]])
temp_local.append(lines_new[j])
# else:
# temp.append(registered_border[np.asarray([lines_new[j, 1], lines_new[j, 0]])])
bounds_edges_global.append(np.asarray(temp_global))
bounds_edges_local.append(np.asarray(temp_local))
return bounds, bounds_edges_global, bounds_edges_local, labels
def get_boundaries(folder, frame):
from pymeshfix import MeshFix
from scipy.spatial import KDTree
id, frame_nr, garment = frame.split()
frame_nr = int(frame_nr)
registered_cloth = np.load('temp/registered_cloth.npy')
registered_faces = np.load('temp/registered_faces.npy')
registred_weights = np.load('temp/registered_weights.npy')
registered_cloth = np.load('temp/matlab_match_registered.npy')
registered_faces = np.load('temp/matlab_match_faces.npy')
registered_weight_faces = np.load('temp/matlab_match_weights_faces.npy')
registred_weights = np.load('temp/matlab_match_weights_weights.npy')
_, faces, _, _ = readOBJ(os.path.join(folder, id, garment + '.obj'))
faces = quads2tris(faces)
template = np.load('temp/mapping_cloth.npy')
registered_meshfix = MeshFix(registered_cloth, registered_faces)
registered_cloth = (template[registered_weight_faces] * registred_weights[:,:,None]).sum(1)
registered_meshfix = MeshFix(registered_cloth, registered_faces.astype(np.int32))
registered_holes = registered_meshfix.extract_holes()
template_meshfix = MeshFix(template, faces)
@@ -457,17 +576,57 @@ def get_boundaries(folder, frame):
template_border_tree = KDTree(template[template_border])
registered_border = []
for border in np.array(registered_holes.points):
registered_border_mask = np.zeros(registered_holes.points.shape[0], dtype=bool)
for i, border in enumerate(np.array(registered_holes.points)):
q = template_border_tree.query(border)
if q[0] > 0.02:
continue
# find the index of the vertex in the original mesh
ind = np.argwhere(np.all(registered_cloth == border, axis=1))
registered_border.extend(ind.ravel())
registered_border_mask[i] = True
np.save('temp/registered_border.npy', registered_border)
np.save('temp/template_border.npy', template_border)
lines = generate_edges(registered_cloth, registered_holes, registered_border)
lines_new = reindex_lines(lines, registered_border_mask)
bounds, bounds_edges_global, bounds_edges_local, labels = get_boundary_components(registered_border, lines_new)
for k in range(labels.max()+1):
bounds_edges_reindexed = reindex_edges(bounds_edges_local[k].copy(), labels == k)
verts_order, edges_order = order(bounds[k], bounds_edges_reindexed)
traces = []
for i in range(bounds_edges_global[k].shape[0]):
traces.append(go.Scatter3d(
x=registered_cloth[bounds_edges_global[k][i],0], y=registered_cloth[bounds_edges_global[k][i],1], z=registered_cloth[bounds_edges_global[k][i],2],
mode='lines', line=dict(color='red', width=1)))
for i in range(15):
traces.append(go.Scatter3d(
x=registered_cloth[bounds_edges_global[k][edges_order][i],0], y=registered_cloth[bounds_edges_global[k][edges_order][i],1], z=registered_cloth[bounds_edges_global[k][edges_order][i],2],
mode='lines', line=dict(color='blue', width=1)))
fig = go.Figure(data=traces)
fig.update_layout(scene = dict(
xaxis = dict(range=[-1,1],),
yaxis = dict(range=[-1,1],),
zaxis = dict(range=[-1,1],),),)
fig.update_layout(scene_aspectmode='cube')
fig.show()
k = 0
traces = [go.Scatter3d(
x=registered_cloth[bounds[k],0], y=registered_cloth[bounds[k],1], z=registered_cloth[bounds[k],2],
mode='markers', line=dict(color='red', width=1))]
fig = go.Figure(data=traces)
fig.update_layout(scene = dict(
xaxis = dict(range=[-1,1],),
yaxis = dict(range=[-1,1],),
zaxis = dict(range=[-1,1],),),)
fig.update_layout(scene_aspectmode='cube')
fig.show()
# plot registered cloth and tempalte as scatterplots and add another two scatter plots for the two boundary sets
fig = go.Figure(data=[
go.Scatter3d(
@@ -501,6 +660,7 @@ def get_boundaries(folder, frame):
pass
def optimize_boundaries(folder, frame):
id, frame_nr, garment = frame.split()
frame_nr = int(frame_nr)
@@ -519,7 +679,6 @@ def optimize_boundaries(folder, frame):
template_border = np.load('temp/template_border.npy')
registered_border = np.load('temp/registered_border.npy')
template = torch.tensor(template).to(device).to(torch.float32)
faces = torch.tensor(faces).to(device)
registered_faces = torch.tensor(registered_faces).to(device)
@@ -527,7 +686,6 @@ def optimize_boundaries(folder, frame):
registered_weights = torch.tensor(registered_weights).to(device).to(torch.float32)
registered_cloth = torch.tensor(registered_cloth).to(device).to(torch.float32)
mesh2 = Meshes(verts=template[None,:,:], faces=faces[None,:,:])
avg_edge_length = mesh_edge_lengths(mesh2).mean()
@@ -553,7 +711,7 @@ def optimize_boundaries(folder, frame):
return mesh_normal_consistency(mesh)
# Optimization loop
for i in range(4000):
for i in range(1):
optimizer.zero_grad()
# find boundaries with the find holes function?
@@ -576,7 +734,7 @@ def optimize_boundaries(folder, frame):
e_loss = edge_loss(mesh1_out)
# loss += edge_loss_custom(torch.stack(mesh1_out.verts_list()), template_orig[None,:,:], mesh1.edges_packed()) * 100
norm_loss = normal_consistency_loss(mesh1_out)
loss += lap_loss * 0.05 + e_loss * 2 + norm_loss * 0.1
loss += lap_loss * 0.5 + e_loss * 2 + norm_loss * 0.1
# Backward pass
loss.backward()
@@ -584,8 +742,8 @@ def optimize_boundaries(folder, frame):
# Print the loss
if i % 10 == 0:
print(f"it: {i} : loss: {loss:.5f} bound_chamfer: {ch_bound_loss:.6f}")
# print(f"it: {i} : loss: {loss:.5f} bound_chamfer: {ch_bound_loss:.6f} chamfer: {ch_loss:.6f} laplacian: {lap_loss:.6f} edge: {e_loss:.6f} normal: {norm_loss:.5f}")
# print(f"it: {i} : loss: {loss:.5f} bound_chamfer: {ch_bound_loss:.6f}")
print(f"it: {i} : loss: {loss:.5f} bound_chamfer: {ch_bound_loss:.6f} laplacian: {lap_loss:.6f} edge: {e_loss:.6f} normal: {norm_loss:.5f}")
registered = mesh1_out.verts_packed().detach().cpu().numpy()
template = mesh2.verts_packed().detach().cpu().numpy()
@@ -613,6 +771,163 @@ def optimize_boundaries(folder, frame):
fig.update_layout(scene_aspectmode='cube')
fig.show()
fig = go.Figure(data=[
go.Scatter3d(
x=registered[:,0], y=registered[:,1], z=registered[:,2],
mode='markers', marker=dict(size=4, color='red')),
go.Scatter3d(
x=template[:,0], y=template[:,1], z=template[:,2],
mode='markers', marker=dict(size=2, color='blue')),
])
fig.update_layout(scene = dict(
xaxis = dict(range=[-1,1],),
yaxis = dict(range=[-1,1],),
zaxis = dict(range=[-1,1],),),)
fig.update_layout(scene_aspectmode='cube')
fig.show()
pass
def load_selected_saves():
registered = np.load('temp/matlab_match_registered.npy')
garment = np.load('temp/matlab_match_garment.npy')
mask = np.load('temp/matlab_match_mask.npy')
mask_bool = np.load('temp/matlab_match_mask.npy')
weights_faces = np.load('temp/matlab_match_weights_faces.npy')
weights_weights = np.load('temp/matlab_match_weights_weights.npy')
faces = np.load('temp/matlab_match_faces.npy')
boundaries = np.load('temp/matlab_match_boundaries.npy')
return registered, garment, mask, mask_bool, weights_faces, weights_weights, faces, boundaries
def optimize_boundaries_2(folder, frame):
registered, garment, mask, mask_bool, weights_faces, weights_weights, faces, boundaries = load_selected_saves()
id, frame_nr, garment_name = frame.split()
registered_cloth = registered
registered_faces = faces
registered_weights = weights_weights
_, template_faces, _, _ = readOBJ(os.path.join(folder, id, garment_name + '.obj'))
template_faces = quads2tris(template_faces)
template = np.load('temp/mapping_cloth.npy')
mapping_mask = mask
mapping_faces = weights_faces
template_border = np.load('temp/template_border.npy')
registered_border = np.load('temp/registered_border.npy')
template = torch.tensor(template).to(device).to(torch.float32)
template_faces = torch.tensor(template_faces).to(device)
registered_faces = torch.tensor(registered_faces).to(device)
mapping_faces = torch.tensor(mapping_faces.astype(np.int64)).to(device)
registered_weights = torch.tensor(registered_weights).to(device).to(torch.float32)
registered_cloth = torch.tensor(registered_cloth).to(device).to(torch.float32)
registered_border = torch.tensor(registered_border).to(device).to(torch.int64)
mesh2 = Meshes(verts=template[None,:,:], faces=template_faces[None,:,:])
avg_edge_length = mesh_edge_lengths(mesh2).mean()
optim_mask = torch.zeros(registered_cloth.shape[0]).to(device).to(torch.bool)
optim_mask[registered_border] = True
mapping_weights_masked = registered_weights[optim_mask]
mapping_weights_nonmasked = registered_weights[~optim_mask]
mapping_weights_masked.requires_grad = True
# Define the optimizer and learning rate
optimizer = torch.optim.Adam([mapping_weights_masked], lr=0.001)
# optimizer = torch.optim.SGD([mesh1.verts_packed()], lr=0.001)
# Define the loss functions
def laplacian_smoothing_loss(mesh):
return mesh_laplacian_smoothing(mesh, method="uniform") # cotcurv uniform cot
def edge_loss(mesh):
return mesh_edge_loss(mesh, target_length=avg_edge_length)
def normal_consistency_loss(mesh):
return mesh_normal_consistency(mesh)
# Optimization loop
for i in range(1000):
optimizer.zero_grad()
# find boundaries with the find holes function?
registered_masked = (template[mapping_faces[optim_mask],:] * mapping_weights_masked[:,:,None]).sum(1)
registered_nonmasked = (template[mapping_faces[~optim_mask],:] * mapping_weights_nonmasked[:,:,None]).sum(1)
# registered = torch.cat((registered_masked, registered_nonmasked), 0)
registered = torch.zeros_like(registered_weights)
registered[optim_mask] = registered_masked
registered[~optim_mask] = registered_nonmasked
# Forward pass
mesh1_out = Meshes(verts=registered[None,:,:], faces=registered_faces[None,:,:])
# ch_loss, _ = chamfer_distance(torch.stack(mesh1_out.verts_list()), torch.stack(mesh2.verts_list()),
# )
ch_bound_loss, _ = chamfer_distance(torch.stack(mesh1_out.verts_list())[:,registered_border,:], torch.stack(mesh2.verts_list())[:, template_border,:],
)
# loss: torch.Tensor = ch_loss * 1 + ch_bound_loss * 20
loss: torch.Tensor = ch_bound_loss * 50
lap_loss = laplacian_smoothing_loss(mesh1_out)
e_loss = edge_loss(mesh1_out)
# loss += edge_loss_custom(torch.stack(mesh1_out.verts_list()), template_orig[None,:,:], mesh1.edges_packed()) * 100
norm_loss = normal_consistency_loss(mesh1_out)
loss += lap_loss * 0.5 + e_loss * 2 + norm_loss * 0.1
# Backward pass
loss.backward()
optimizer.step()
# Print the loss
if i % 10 == 0:
# print(f"it: {i} : loss: {loss:.5f} bound_chamfer: {ch_bound_loss:.6f}")
print(f"it: {i} : loss: {loss:.5f} bound_chamfer: {ch_bound_loss:.6f} laplacian: {lap_loss:.6f} edge: {e_loss:.6f} normal: {norm_loss:.5f}")
registered = mesh1_out.verts_packed().detach().cpu().numpy()
template = mesh2.verts_packed().detach().cpu().numpy()
template_faces = template_faces.detach().cpu().numpy()
optim_mask = optim_mask.detach().cpu().numpy()
registered_faces = registered_faces.detach().cpu().numpy()
registered_border = registered_border.detach().cpu().numpy()
# faces, F = F, faces
# verts, star_body = star_body, verts
from scipy.spatial import KDTree
template_border_tree = KDTree(template[template_border,:])
for i, border in enumerate(registered_border):
dist, idx = template_border_tree.query(registered[border,:], k=2)
weights_faces[border,:] = np.concatenate((template_border[idx], [0]))
weights_weights[border,:] = np.concatenate((1 - dist / np.sum(dist), [0]))
registered = (template[weights_faces] * weights_weights[:,:,None]).sum(1)
fig = go.Figure(data=[
go.Mesh3d(
x=template[:,0], y=template[:,1], z=template[:,2],
i=template_faces[:,0], j=template_faces[:,1], k=template_faces[:,2],
color='lightblue', opacity=0.80),
go.Mesh3d(
x=registered[:,0], y=registered[:,1], z=registered[:,2],
i=registered_faces[:,0], j=registered_faces[:,1], k=registered_faces[:,2],
color='lightpink', opacity=0.50),
go.Scatter3d(
x=registered[registered_border,0], y=registered[registered_border,1], z=registered[registered_border,2],
mode='markers', marker=dict(size=4, color='red')),
go.Scatter3d(
x=template[template_border,0], y=template[template_border,1], z=template[template_border,2],
mode='markers', marker=dict(size=2, color='blue')),
])
fig.update_layout(scene = dict(
xaxis = dict(range=[-1,1],),
yaxis = dict(range=[-1,1],),
zaxis = dict(range=[-1,1],),),)
fig.update_layout(scene_aspectmode='cube')
fig.show()
fig = go.Figure(data=[
go.Scatter3d(
@@ -631,9 +946,98 @@ def optimize_boundaries(folder, frame):
pass
def flatten_boundary(folder, frame):
from scipy.spatial import KDTree
registered, garment, mask, mask_bool, weights_faces, weights_weights, faces, boundaries = load_selected_saves()
id, frame_nr, garment_name = frame.split()
registered_faces = faces
registered_weights = weights_weights
_, template_faces, _, _ = readOBJ(os.path.join(folder, id, garment_name + '.obj'))
template_faces = quads2tris(template_faces)
template = np.load('temp/mapping_cloth.npy')
registered_cloth = (template[weights_faces] * weights_weights[:,:,None]).sum(1)
template_border = np.load('temp/template_border.npy')
registered_border = np.load('temp/registered_border.npy')
template_border_tree = KDTree(template[template_border,:])
for i, border in enumerate(registered_border):
dist, idx = template_border_tree.query(registered_cloth[border,:], k=2)
weights_faces[border,:] = np.concatenate((template_border[idx], [0]))
weights_weights[border,:] = np.concatenate((1 - dist / np.sum(dist), [0]))
registered_cloth = (template[weights_faces] * weights_weights[:,:,None]).sum(1)
fig = go.Figure(data=[
go.Mesh3d(
x=template[:,0], y=template[:,1], z=template[:,2],
i=template_faces[:,0], j=template_faces[:,1], k=template_faces[:,2],
color='lightblue', opacity=0.80),
go.Mesh3d(
x=registered_cloth[:,0], y=registered_cloth[:,1], z=registered_cloth[:,2],
i=registered_faces[:,0], j=registered_faces[:,1], k=registered_faces[:,2],
color='lightpink', opacity=0.50),
go.Scatter3d(
x=registered_cloth[registered_border,0], y=registered_cloth[registered_border,1], z=registered_cloth[registered_border,2],
mode='markers', marker=dict(size=4, color='red')),
go.Scatter3d(
x=template[template_border,0], y=template[template_border,1], z=template[template_border,2],
mode='markers', marker=dict(size=2, color='blue')),
])
fig.update_layout(scene = dict(
xaxis = dict(range=[-1,1],),
yaxis = dict(range=[-1,1],),
zaxis = dict(range=[-1,1],),),)
fig.update_layout(scene_aspectmode='cube')
fig.show()
pass
def fill_holes(folder, frame):
from scipy.spatial import KDTree
from pymeshfix import MeshFix
import pyvista as pv
id, frame_nr, garment = frame.split()
frame_nr = int(frame_nr)
registered_cloth = np.load('temp/registered_cloth.npy')
registered_faces = np.load('temp/registered_faces.npy')
registered_weights = np.load('temp/registered_weights.npy')
_, faces, _, _ = readOBJ(os.path.join(folder, id, garment + '.obj'))
faces = quads2tris(faces)
template = np.load('temp/mapping_cloth.npy')
mapping_mask = np.load('temp/mapping_mask.npy')
mapping_faces = np.load('temp/mapping_faces.npy')
mapping_weights = np.load('temp/mapping_weights.npy')
mapping_faces, mapping_weights = mapping_faces[mapping_mask], mapping_weights[mapping_mask]
template_border = np.load('temp/template_border.npy')
registered_border = np.load('temp/registered_border.npy')
template_border_tree = KDTree(template[template_border])
registered_border_tree = KDTree(registered_cloth[registered_border])
registered_meshfix = MeshFix(registered_cloth, registered_faces)
registered_holes = registered_meshfix.extract_holes()
template_meshfix = MeshFix(template, faces)
template_holes = template_meshfix.extract_holes()
for border in np.array(registered_holes.points):
q = registered_border_tree.query(border)
if __name__ == "__main__":
folder = '/data-net/code/cloth3d/train'
# folder = r'D:\Work\code\cloth3d\train'
# folder = '/data-net/code/cloth3d/train'
folder = r'D:\Work\code\cloth3d\train'
# frames = [f'00761_{i}' for i in range(300)]
# folder = r'Z:\Work\Huni\Barcelona\Dataset\cloth3d\train'
frames = get_frames(folder, 'frames_all.txt')
@@ -659,7 +1063,9 @@ if __name__ == "__main__":
# register(folder, frame)
# get_boundaries(folder, frame)
optimize_boundaries(folder, frame)
get_boundaries(folder, frame)
# optimize_boundaries_2(folder, frame)
# flatten_boundary(folder, frame)
# fill_holes(folder, frame)
break
pass